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spotfire decision site  (TIBCO)


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    TIBCO spotfire decision site
    Spotfire Decision Site, supplied by TIBCO, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/spotfire+decision+site/spotfire+decisionsite/pm40601435-194-7-10
    Average 90 stars, based on 1 article reviews
    spotfire decision site - by Bioz Stars, 2026-09
    90/100 stars

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    Related Articles

    Concentration Assay:

    Article Title: Secretin Receptor as a Target in Gastrointestinal Cancer: Expression Analysis and Ligand Development
    Article Snippet: Measurements were performed using the EnVision Analyzer (PerkinElmer, Rodgau, Germany). .. For evaluation, concentration–response curves (signal-to-noise ratios plotted) employing the derived statistical mean and SD for estimation of the respective EC 50 were calculated using Spotfire Decision Site (TIBCO, Palo Alto, CA, USA). ..

    Article Title: Secretin Receptor as a Target in Gastrointestinal Cancer: Expression Analysis and Ligand Development.
    Article Snippet: Measurements were performed using the EnVision Analyzer (PerkinElmer, Rodgau, Germany). .. For evaluation, concentration–response curves (signal-to-noise ratios plotted) employing the derived statistical mean and SD for estimation of the respective EC50 were calculated using Spotfire Decision Site (TIBCO, Palo Alto, CA, USA). ..

    Derivative Assay:

    Article Title: Secretin Receptor as a Target in Gastrointestinal Cancer: Expression Analysis and Ligand Development
    Article Snippet: Measurements were performed using the EnVision Analyzer (PerkinElmer, Rodgau, Germany). .. For evaluation, concentration–response curves (signal-to-noise ratios plotted) employing the derived statistical mean and SD for estimation of the respective EC 50 were calculated using Spotfire Decision Site (TIBCO, Palo Alto, CA, USA). ..

    Article Title: Secretin Receptor as a Target in Gastrointestinal Cancer: Expression Analysis and Ligand Development.
    Article Snippet: Measurements were performed using the EnVision Analyzer (PerkinElmer, Rodgau, Germany). .. For evaluation, concentration–response curves (signal-to-noise ratios plotted) employing the derived statistical mean and SD for estimation of the respective EC50 were calculated using Spotfire Decision Site (TIBCO, Palo Alto, CA, USA). ..

    other:

    Article Title: Methods for treating, diagnosing, and monitoring rheumatoid arthritis
    Article Snippet: Briefly, Affymetrix probeset identifiers that were specifically upregulated within each subtype ( ̃1000 top ranked probesets) were uploaded to the web-server.

    Article Title: Antimicrobial Stewardship Barriers and Goals in Pediatric Oncology and Bone Marrow Transplantation: A Survey of Antimicrobial Stewardship Practitioners.
    Article Snippet: We undertook a cross-sectional survey of antimicrobial stewardship clinicians in North America and Australasia regarding practices, goals, and barriers to implementation of stewardship for pediatric oncology patients.. Goals and barriers were similar regardless of clinician or institutional characteristics and geographic location.. Strategies addressing these factors could help optimize antimicrobial use.



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    ( A ) . <t>Microarray</t> . Venn diagram shows the total number of genes perturbed in Mtb -H or Mtb -A infected- relative to uninfected-Rh-BMDMs. Total 226 genes (164 genes induced (UP), 62 genes repressed (DN) upon infection with Mtb -A; 2996 genes (1474 genes induced (UP), 1522 genes repressed (DN) upon infection with Mtb -H). Common genes (from up- or down-regulated gene dataset in both Mtb -H and -A group) are shown with overlap. For a description of the common genes e.g. RIPK4 , see . Heat-map clusters; green, lower expression; red, higher expression. The data are shown from independent experiments with Rh-BMDMs isolated from two Rhesus macaques. ( B ) RT-qPCR. The relative fold change in transcripts ( Mtb -H infected Rh-BMDM to Mtb -A infected Rh-BMDM) in microarray (grey bars) and RT-qPCR (white bars) is shown. The relative fold change values ( Mtb -H to Mtb -A) microarray and RT-qPCR (within bracket) are shown below; TNF, 5.3 (14.42); IL5, 3.49 (1.38); CASP8AP2, 2.93 (2.71); CXCL10, −5.7 (−8.7). ( C ) Cytokine Assay and Multilabel confocal microscopy. Measurements of TNF in supernatants, Mtb -H (red) or Mtb -A (green). Experiment was performed in triplicate and values were plotted using GraphPad Prism version 6.0b. The data is statistically significant; Student’s t-test, **P = 0.0027. Confocal microscopy shows secretion of TNF (green signal) detected only in the Rh-BMDMs (blue signal) infected with Mtb -H (red signal) (top panels) at 24 hr and 72 hr. The results are shown from Rh-BMDMs derived from two rhesus macaques.
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    ( A ) . <t>Microarray</t> . Venn diagram shows the total number of genes perturbed in Mtb -H or Mtb -A infected- relative to uninfected-Rh-BMDMs. Total 226 genes (164 genes induced (UP), 62 genes repressed (DN) upon infection with Mtb -A; 2996 genes (1474 genes induced (UP), 1522 genes repressed (DN) upon infection with Mtb -H). Common genes (from up- or down-regulated gene dataset in both Mtb -H and -A group) are shown with overlap. For a description of the common genes e.g. RIPK4 , see . Heat-map clusters; green, lower expression; red, higher expression. The data are shown from independent experiments with Rh-BMDMs isolated from two Rhesus macaques. ( B ) RT-qPCR. The relative fold change in transcripts ( Mtb -H infected Rh-BMDM to Mtb -A infected Rh-BMDM) in microarray (grey bars) and RT-qPCR (white bars) is shown. The relative fold change values ( Mtb -H to Mtb -A) microarray and RT-qPCR (within bracket) are shown below; TNF, 5.3 (14.42); IL5, 3.49 (1.38); CASP8AP2, 2.93 (2.71); CXCL10, −5.7 (−8.7). ( C ) Cytokine Assay and Multilabel confocal microscopy. Measurements of TNF in supernatants, Mtb -H (red) or Mtb -A (green). Experiment was performed in triplicate and values were plotted using GraphPad Prism version 6.0b. The data is statistically significant; Student’s t-test, **P = 0.0027. Confocal microscopy shows secretion of TNF (green signal) detected only in the Rh-BMDMs (blue signal) infected with Mtb -H (red signal) (top panels) at 24 hr and 72 hr. The results are shown from Rh-BMDMs derived from two rhesus macaques.
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    ( A ) . <t>Microarray</t> . Venn diagram shows the total number of genes perturbed in Mtb -H or Mtb -A infected- relative to uninfected-Rh-BMDMs. Total 226 genes (164 genes induced (UP), 62 genes repressed (DN) upon infection with Mtb -A; 2996 genes (1474 genes induced (UP), 1522 genes repressed (DN) upon infection with Mtb -H). Common genes (from up- or down-regulated gene dataset in both Mtb -H and -A group) are shown with overlap. For a description of the common genes e.g. RIPK4 , see . Heat-map clusters; green, lower expression; red, higher expression. The data are shown from independent experiments with Rh-BMDMs isolated from two Rhesus macaques. ( B ) RT-qPCR. The relative fold change in transcripts ( Mtb -H infected Rh-BMDM to Mtb -A infected Rh-BMDM) in microarray (grey bars) and RT-qPCR (white bars) is shown. The relative fold change values ( Mtb -H to Mtb -A) microarray and RT-qPCR (within bracket) are shown below; TNF, 5.3 (14.42); IL5, 3.49 (1.38); CASP8AP2, 2.93 (2.71); CXCL10, −5.7 (−8.7). ( C ) Cytokine Assay and Multilabel confocal microscopy. Measurements of TNF in supernatants, Mtb -H (red) or Mtb -A (green). Experiment was performed in triplicate and values were plotted using GraphPad Prism version 6.0b. The data is statistically significant; Student’s t-test, **P = 0.0027. Confocal microscopy shows secretion of TNF (green signal) detected only in the Rh-BMDMs (blue signal) infected with Mtb -H (red signal) (top panels) at 24 hr and 72 hr. The results are shown from Rh-BMDMs derived from two rhesus macaques.
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    Image Search Results


    ( A ) . Microarray . Venn diagram shows the total number of genes perturbed in Mtb -H or Mtb -A infected- relative to uninfected-Rh-BMDMs. Total 226 genes (164 genes induced (UP), 62 genes repressed (DN) upon infection with Mtb -A; 2996 genes (1474 genes induced (UP), 1522 genes repressed (DN) upon infection with Mtb -H). Common genes (from up- or down-regulated gene dataset in both Mtb -H and -A group) are shown with overlap. For a description of the common genes e.g. RIPK4 , see . Heat-map clusters; green, lower expression; red, higher expression. The data are shown from independent experiments with Rh-BMDMs isolated from two Rhesus macaques. ( B ) RT-qPCR. The relative fold change in transcripts ( Mtb -H infected Rh-BMDM to Mtb -A infected Rh-BMDM) in microarray (grey bars) and RT-qPCR (white bars) is shown. The relative fold change values ( Mtb -H to Mtb -A) microarray and RT-qPCR (within bracket) are shown below; TNF, 5.3 (14.42); IL5, 3.49 (1.38); CASP8AP2, 2.93 (2.71); CXCL10, −5.7 (−8.7). ( C ) Cytokine Assay and Multilabel confocal microscopy. Measurements of TNF in supernatants, Mtb -H (red) or Mtb -A (green). Experiment was performed in triplicate and values were plotted using GraphPad Prism version 6.0b. The data is statistically significant; Student’s t-test, **P = 0.0027. Confocal microscopy shows secretion of TNF (green signal) detected only in the Rh-BMDMs (blue signal) infected with Mtb -H (red signal) (top panels) at 24 hr and 72 hr. The results are shown from Rh-BMDMs derived from two rhesus macaques.

    Journal: PLoS ONE

    Article Title: Role of TNF in the Altered Interaction of Dormant Mycobacterium tuberculosis with Host Macrophages

    doi: 10.1371/journal.pone.0095220

    Figure Lengend Snippet: ( A ) . Microarray . Venn diagram shows the total number of genes perturbed in Mtb -H or Mtb -A infected- relative to uninfected-Rh-BMDMs. Total 226 genes (164 genes induced (UP), 62 genes repressed (DN) upon infection with Mtb -A; 2996 genes (1474 genes induced (UP), 1522 genes repressed (DN) upon infection with Mtb -H). Common genes (from up- or down-regulated gene dataset in both Mtb -H and -A group) are shown with overlap. For a description of the common genes e.g. RIPK4 , see . Heat-map clusters; green, lower expression; red, higher expression. The data are shown from independent experiments with Rh-BMDMs isolated from two Rhesus macaques. ( B ) RT-qPCR. The relative fold change in transcripts ( Mtb -H infected Rh-BMDM to Mtb -A infected Rh-BMDM) in microarray (grey bars) and RT-qPCR (white bars) is shown. The relative fold change values ( Mtb -H to Mtb -A) microarray and RT-qPCR (within bracket) are shown below; TNF, 5.3 (14.42); IL5, 3.49 (1.38); CASP8AP2, 2.93 (2.71); CXCL10, −5.7 (−8.7). ( C ) Cytokine Assay and Multilabel confocal microscopy. Measurements of TNF in supernatants, Mtb -H (red) or Mtb -A (green). Experiment was performed in triplicate and values were plotted using GraphPad Prism version 6.0b. The data is statistically significant; Student’s t-test, **P = 0.0027. Confocal microscopy shows secretion of TNF (green signal) detected only in the Rh-BMDMs (blue signal) infected with Mtb -H (red signal) (top panels) at 24 hr and 72 hr. The results are shown from Rh-BMDMs derived from two rhesus macaques.

    Article Snippet: Briefly, we used GenePix 4000B to scan chip images, GenePix Pro 6.0 to acquire raw data and Spotfire Decision Site for Microarray Analysis (TIBCO-Spotfire Inc) to perform data analysis using protocols that have been developed by us .

    Techniques: Microarray, Infection, Expressing, Isolation, Quantitative RT-PCR, Cytokine Assay, Confocal Microscopy, Derivative Assay